Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_32430218_32430304_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32430218 - 32430304

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTCACTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTGAT

U12 Branch Point Sequence:

TTTTCCTTCACT

Flanking Amino Acid:

ASCRIKLLSIGSSIDLDRVQ

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

0.9

72.9

31.2

Major BPS

74.7

0.61

0.9

63.4

35.6

Major PPT

76.2

0.59

0.8

71.1

34.5

Minor 5ss

28.5

-2.5

2.8

31.7

36.2

Minor BPS

84.6

1.17

1.6

100

28.8

Associated Gene:

Gene:

C10orf88

Ensembl Gene ID:

ENSAPLG00000018529

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046848

32427694 - 32432191

4498