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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32439748_32440244_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32439748 - 32440244

Intron Length:

497

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAATGCA

5'SS Class:

major

3'SS Sequence:

TTTTAATTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTTTTTAATT

Flanking Amino Acid:

STSSGDKLLRKKRAVLPQES

Intron Amino Acid Position:

209

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.62

68.4

36.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

87.2

0.84

0.8

81.7

34.6

Minor 5ss

31.9

-2.1

3.2

32.7

42.2

Minor BPS

72.1

0.77

1.1

79.54

37.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016125

32433668 - 32449054

15387

ENSAPLT00000040306

32433668 - 32448766

15099