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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32440942_32441373_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32440942 - 32441373

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTGTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TCTTTCAAAAGT

Flanking Amino Acid:

RSRNDVSHLIIGRGSYGGSI

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

89.9

23.2

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

78.7

0.65

72.9

42.2

Minor 5ss

48.6

-0.1

2.8

71.8

38.1

Minor BPS

47.7

-0

2.2

71.76

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040306

32433668 - 32448766

15099

ENSAPLT00000016125

32433668 - 32449054

15387