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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32442568_32443450_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

32442568 - 32443450

Intron Length:

883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGATTT

5'SS Class:

strong_major

3'SS Sequence:

TTATGCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATGTTTGTAATA

Flanking Amino Acid:

PASYIMYSTDKGSRNFSTCS

Intron Amino Acid Position:

381

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

84.4

26.9

Major BPS

84.4

0.85

1.1

34.5

Major PPT

82.2

0.72

0.9

73.5

41.6

Minor 5ss

45.6

-0.5

3.1

65.7

39.5

Minor BPS

51.2

0.03

64.28

37.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015412

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040306

32433668 - 32448766

15099

ENSAPLT00000016125

32433668 - 32449054

15387