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Intron Name: Anas_platyrhynchos_platyrhynchos_6_32471758_32473138_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
32471758 - 32473138

Intron Length:
1381

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCA|GTAAGTTGC

5'SS Class:
major

3'SS Sequence:
TAATTCATCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TTATTTTTAATT

Flanking Amino Acid:
FVMANTDPASGYRGITCFIV

Intron Amino Acid Position:
231

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.6
0.6
1
67.3
39.4

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
67.9
0.4
0.9
59.8
41

Minor 5ss
42.7
-0.8
2.8
58.3
40.4

Minor BPS
79
0.99
1
87.98
30.9

Associated Gene:

Gene:
ACADSB

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

32468964 - 32480075
11112

32465804 - 32480075
14272