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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3295849_3296606_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3295849 - 3296606

Intron Length:

758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TTGTTTCTACTC

Flanking Amino Acid:

TLYEKLREQALSPTILMGLH

Intron Amino Acid Position:

1146

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

73.1

43.9

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

81.7

0.71

0.7

75.8

26.4

Minor 5ss

35.6

-1.6

2.7

43.3

43.7

Minor BPS

47.7

-0.1

1.9

61.63

38.8

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188