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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3296679_3298003_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3296679 - 3298003

Intron Length:

1325

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTAAGTCCT

5'SS Class:

major

3'SS Sequence:

TATTTTACTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

CCTATTTTACTT

Flanking Amino Acid:

QRCSAVATDPKTRRKLEDAL

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.3

0.45

1.3

66.6

44.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

80.8

0.69

0.8

79.3

33.6

Minor 5ss

38.7

-1.3

56.4

40.7

Minor BPS

49.2

0.02

1.6

62.86

42.7

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188