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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3298121_3298542_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3298121 - 3298542

Intron Length:

422

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCCAAG

5'SS Class:

weak_major

3'SS Sequence:

CTGTCTCTGGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTCAGC

Flanking Amino Acid:

PGAPKEGSLQYHQLPAERVE

Intron Amino Acid Position:

1083

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.9

0.42

1.2

61.5

44.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

72.6

0.51

69.1

Minor 5ss

51.4

0.05

2.3

65.5

45.8

Minor BPS

49.3

-0

2.3

68.72

42.5

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015921

3294451 - 3320638

26188

ENSAPLT00000042973

3295669 - 3320638

24970