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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3299981_3302543_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3299981 - 3302543

Intron Length:

2563

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTACT

5'SS Class:

strong_major

3'SS Sequence:

TGTCTCTTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

TGTCTCTTGACA

Flanking Amino Acid:

PAASLPPPPTAQESWTDPSV

Intron Amino Acid Position:

1016

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.1

1.13

0.6

93.5

20.3

Major BPS

63.7

0.34

1.2

41.8

Major PPT

76.1

0.59

72.3

37.9

Minor 5ss

38.4

-1.3

2.8

52.3

44.3

Minor BPS

71.6

0.67

1.2

76.56

33.6

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015921

3294451 - 3320638

26188