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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3303485_3304323_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3303485 - 3304323

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTAATTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

CGTTTTGTAATT

Flanking Amino Acid:

RKTGPKHPEKPSYQSLTPSA

Intron Amino Acid Position:

837

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

72.7

44.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

81.1

0.7

0.9

74.9

38.8

Minor 5ss

42.4

-0.8

3.5

64.4

Minor BPS

52.2

0.15

71.21

40.9

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188