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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3304513_3305138_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3304513 - 3305138

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TAGTTTGTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

CTTCTCCTAATG

Flanking Amino Acid:

MDYLPNSSKELLIEQLRDRL

Intron Amino Acid Position:

774

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

81.9

0.79

0.9

80.1

Major PPT

79.7

0.67

77.2

41.6

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

53.1

-0

1.8

60.92

41.4

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188