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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3305313_3305940_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3305313 - 3305940

Intron Length:

628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGGTG

5'SS Class:

major

3'SS Sequence:

CCTGCCTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGAACGGTACAT

Flanking Amino Acid:

HETSSPLALQDLVEKVMVLS

Intron Amino Acid Position:

716

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

61.3

43.5

Major BPS

82.1

0.8

71.6

36.4

Major PPT

76.9

0.61

0.8

31.9

Minor 5ss

31.1

-2.2

3.9

49.3

Minor BPS

36.1

-0.9

2.6

55.53

45.8

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188