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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3306087_3307194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3306087 - 3307194

Intron Length:

1108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGCCGT

5'SS Class:

major

3'SS Sequence:

TCTTCCTTTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TAAGTGTTAAAT

Flanking Amino Acid:

AKHEDYTQLCDMLGARLESE

Intron Amino Acid Position:

667

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

46.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

85.1

0.79

0.7

80.9

24.2

Minor 5ss

45.8

-0.4

2.9

62.1

44.5

Minor BPS

47.6

-0.1

2.2

66.76

43.6

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188