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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3308680_3309615_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3308680 - 3309615

Intron Length:

936

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCCT

5'SS Class:

strong_major

3'SS Sequence:

ACTCTTTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

ACCTCTTGCACT

Flanking Amino Acid:

NEANTAQTDQLLINTSDDVA

Intron Amino Acid Position:

529

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

77.1

37.8

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

72.8

0.51

0.9

67.9

37.1

Minor 5ss

42.9

-0.8

2.8

59.8

44.7

Minor BPS

49.2

0.02

1.9

66.49

44.6

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188