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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3311760_3312511_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3311760 - 3312511

Intron Length:

752

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGTGAA

5'SS Class:

major

3'SS Sequence:

CTCTCTTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAA

U12 Branch Point Sequence:

TTATTAAAAAAT

Flanking Amino Acid:

IRRPVGVSFAFGGKLVTFGL

Intron Amino Acid Position:

399

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

71.7

33.7

Major BPS

82.6

0.81

0.8

82.2

24.5

Major PPT

84.5

0.78

0.7

83.4

24.9

Minor 5ss

34.2

-1.8

3.2

45.6

43.6

Minor BPS

-0.3

2.1

68.15

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188