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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33120806_33124795_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

33120806 - 33124795

Intron Length:

3990

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCAGCCCCA

5'SS Class:

weak_major

3'SS Sequence:

CGGCCTGGGCGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCAAGAT

U12 Branch Point Sequence:

GGCGCCAAGATG

Flanking Amino Acid:

DRERGRGSCRGVRGLLLDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.4

47.4

42.6

Major BPS

-0.1

1.1

40.7

38.3

Major PPT

41.1

-0.5

1.7

33.9

40.8

Minor 5ss

32.5

-2

4.2

48.1

47.6

Minor BPS

38.7

-1

1.9

36.37

39.7

Associated Gene:

Gene:

LHPP

Ensembl Gene ID:

ENSAPLG00000015176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015825

33120777 - 33186676

65900