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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3312665_3313535_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3312665 - 3313535

Intron Length:

871

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTCC

5'SS Class:

strong_major

3'SS Sequence:

CATATGATTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTTAT

U12 Branch Point Sequence:

TGTATCTTATCC

Flanking Amino Acid:

EAQQKTQADKISSSFNNLDP

Intron Amino Acid Position:

348

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

69.9

35.4

Major BPS

82.6

0.81

0.8

71.7

Major PPT

65.4

0.35

55.4

44.2

Minor 5ss

37.3

-1.4

3.3

50.9

45.8

Minor BPS

62.1

0.36

1.6

71.64

39.3

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042973

3295669 - 3320638

24970

ENSAPLT00000015921

3294451 - 3320638

26188