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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33138109_33139028_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33138109 - 33139028

Intron Length:

920

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATTTTAT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGCAT

U12 Branch Point Sequence:

TTTTTTTTTCCA

Flanking Amino Acid:

DVGAYMKALEYACDVEAEVV

Intron Amino Acid Position:

180

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

78.6

31.1

Major BPS

54.5

0.11

1.4

65.8

Major PPT

98.2

1.08

0.5

92.3

26.6

Minor 5ss

-0.2

2.5

66.9

44.3

Minor BPS

44.4

-0.4

3.6

74.12

37.8

Associated Gene:

Gene:

LHPP

Ensembl Gene ID:

ENSAPLG00000015176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015825

33120777 - 33186676

65900