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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33146431_33186585_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33146431 - 33186585

Intron Length:

40155

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CCTGTCTCACTT

Flanking Amino Acid:

RAVQVRTGKYRPCDENHPQV

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

1.2

35.3

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

82.9

0.74

0.8

77.1

31.6

Minor 5ss

28.4

-2.5

2.9

33.4

41.6

Minor BPS

45.1

-0.2

1.9

58.48

45.6

Associated Gene:

Gene:

LHPP

Ensembl Gene ID:

ENSAPLG00000015176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015825

33120777 - 33186676

65900