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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3316192_3316692_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3316192 - 3316692

Intron Length:

501

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTGAA

5'SS Class:

major

3'SS Sequence:

TTTTTGTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CATTGCTGAATT

Flanking Amino Acid:

IIKVSDHSNRMHCSGMAWHP

Intron Amino Acid Position:

213

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.2

0.52

67.4

33.4

Major BPS

100

1.24

0.5

100

Major PPT

84.7

0.78

0.8

77.9

36.6

Minor 5ss

27.8

-2.5

27.4

37.6

Minor BPS

56.3

0.28

1.9

73.86

43.2

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015921

3294451 - 3320638

26188

ENSAPLT00000042973

3295669 - 3320638

24970