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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3317586_3318373_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3317586 - 3318373

Intron Length:

788

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTCAG

U12 Branch Point Sequence:

TTCAGCTGAGCT

Flanking Amino Acid:

VRALDFNPFQSNLLASGAND

Intron Amino Acid Position:

134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

83.1

28.6

Major BPS

58.3

0.21

1.7

71.4

45.1

Major PPT

1.03

0.5

92.7

17.1

Minor 5ss

42.1

-0.9

2.5

53.5

43.9

Minor BPS

-0.1

2.1

69.65

46.7

Associated Gene:

Gene:

SEC31B

Ensembl Gene ID:

ENSAPLG00000015227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015921

3294451 - 3320638

26188

ENSAPLT00000042973

3295669 - 3320638

24970