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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33202277_33208700_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33202277 - 33208700

Intron Length:

6424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

ATTTCTGCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTTTGTCATTT

Flanking Amino Acid:

GPTLFSCGVMENDRWGDLSR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

76.2

39.9

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

74.6

0.55

0.9

66.2

40.2

Minor 5ss

35.6

-1.6

2.7

37.6

Minor BPS

47.1

-0.1

2.4

75.31

42.2

Associated Gene:

Gene:

FAM53B

Ensembl Gene ID:

ENSAPLG00000015172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015808

33190990 - 33216545

25556