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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33215515_33216364_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

33215515 - 33216364

Intron Length:

850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTTCGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAGTAAT

U12 Branch Point Sequence:

CAGTGAGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.6

0.91

0.9

85.3

32.2

Major BPS

58.9

0.22

1.4

61.7

43.1

Major PPT

88.6

0.87

0.6

84.5

23.1

Minor 5ss

38.9

-1.2

3.1

53.5

43.9

Minor BPS

-0.6

2.4

57.55

45.6

Associated Gene:

Gene:

FAM53B

Ensembl Gene ID:

ENSAPLG00000015172

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015808

33190990 - 33216545

25556