Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_33226077_33226979_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33226077 - 33226979

Intron Length:

903

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ACTTCTGGTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAAGAT

U12 Branch Point Sequence:

GATCGTTTCACA

Flanking Amino Acid:

KEGISNIKLQVEDFLAPSAD

Intron Amino Acid Position:

170

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.11

0.7

88.7

23.8

Major BPS

59.6

0.24

1.1

55.4

40.4

Major PPT

67.8

0.4

65.9

40.3

Minor 5ss

37.2

-1.4

3.3

45.2

Minor BPS

46.2

-0.3

2.1

58.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015137

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015772

33224830 - 33230199

5370