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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33243941_33247061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33243941 - 33247061

Intron Length:

3121

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTAC

5'SS Class:

strong_major

3'SS Sequence:

CTTCCTTTTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

CTTCCTTTTATA

Flanking Amino Acid:

QRKNEKEQKLRLQQAILSRQ

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

81.2

26.2

Major BPS

73.5

0.58

79.3

29.4

Major PPT

84.2

0.77

0.7

79.7

25.9

Minor 5ss

42.2

-0.9

2.8

52.8

38.5

Minor BPS

58.3

0.25

1.6

68.17

38.4

Associated Gene:

Gene:

ABRAXAS2

Ensembl Gene ID:

ENSAPLG00000014971

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015622

33231663 - 33247528

15866