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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33540428_33542064_F

Intron Information:

Intron Rank:

147951

Intron Class:

major

Intron Phase:

Intron Coordinates:

33540428 - 33542064

Intron Length:

1637

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTGCAAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAA

U12 Branch Point Sequence:

GCCACCTGAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

95.7

1.08

0.7

85.2

32.2

Major BPS

60.8

0.27

51.3

35.5

Major PPT

64.8

0.33

1.1

66.4

38.7

Minor 5ss

34.4

-1.8

3.3

49.7

46.6

Minor BPS

57.3

0.21

1.6

60.91

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029652

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041778

33540063 - 33561759

21697