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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33609543_33610022_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
33609543 - 33610022

Intron Length:
480

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTTAACAT

5'SS Class:
major

3'SS Sequence:
ATTCTGATTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTGAT

U12 Branch Point Sequence:
TACTACTTAGTT

Flanking Amino Acid:
EVLPTALKEKGIPLESLTVY

Intron Amino Acid Position:
160

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
61.3
0.27
1.2
58.8
39.8

Major BPS
91.3
1.03
0.7
79.6
35.6

Major PPT
77.3
0.62
0.9
70.5
39.3

Minor 5ss
35.4
-1.7
3.1
48.2
47.4

Minor BPS
58.1
0.33
1.8
74.21
42.7

Associated Gene:

Gene:
UROS

Ensembl Gene ID:

Chromosome:
6

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33605790 - 33618796
13007

33605790 - 33620765
14976