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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33623124_33623383_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33623124 - 33623383

Intron Length:

260

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGTTTA

5'SS Class:

major

3'SS Sequence:

TTCTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTTTGAT

U12 Branch Point Sequence:

ATTTTCTGCATT

Flanking Amino Acid:

EPDCRNKALQEVNIEFEAHS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

1.1

77.9

32.4

Major BPS

78.6

0.71

1.2

71.4

45.1

Major PPT

0.85

0.6

84.7

Minor 5ss

46.2

-0.4

2.4

58.8

45.7

Minor BPS

55.8

0.26

1.9

78.66

37.9

Associated Gene:

Gene:

BCCIP

Ensembl Gene ID:

ENSAPLG00000012566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019517

33622478 - 33630982

8505