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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33627592_33630811_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33627592 - 33630811

Intron Length:

3220

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACGTAC

5'SS Class:

major

3'SS Sequence:

TTTTGTTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

AAATGCTTAATC

Flanking Amino Acid:

ANAEEEFFYEKALLKFNYSV

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

37.3

Major BPS

81.9

0.79

0.9

80.1

Major PPT

76.9

0.6

0.9

77.1

37.1

Minor 5ss

42.6

-0.8

3.2

58.3

46.6

Minor BPS

61.6

0.34

1.7

66.98

38.5

Associated Gene:

Gene:

BCCIP

Ensembl Gene ID:

ENSAPLG00000012566

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019517

33622478 - 33630982

8505

ENSAPLT00000013097

33621399 - 33630982

9584