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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33675744_33681209_F

Intron Information:

Intron Rank:

126373

Intron Class:

major

Intron Phase:

Intron Coordinates:

33675744 - 33681209

Intron Length:

5466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TTCTCTTTACTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

70.7

0.47

71.5

33.4

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

0.67

1.6

82.98

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018085

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040076

33671594 - 33681248

9655

ENSAPLT00000033115

33675591 - 33682140

6550