Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_33694802_33695259_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33694802 - 33695259

Intron Length:

458

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTCCC

5'SS Class:

strong_major

3'SS Sequence:

GTTATTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTTAT

U12 Branch Point Sequence:

AAGTTTATAGCT

Flanking Amino Acid:

MKPQNTNIPKRDGPRRPLPY

Intron Amino Acid Position:

803

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

72.6

37.3

Major BPS

72.5

0.56

1.1

63.4

Major PPT

83.1

0.74

0.8

77.4

36.8

Minor 5ss

37.2

-1.4

2.9

46.5

35.3

Minor BPS

47.4

-0.1

1.8

63.97

40.5

Associated Gene:

Gene:

ADAM12

Ensembl Gene ID:

ENSAPLG00000011037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011573

33686514 - 33867693

181180