Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_33714113_33719012_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33714113 - 33719012

Intron Length:

4900

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAAGACAC

5'SS Class:

major

3'SS Sequence:

ATCCCCCGTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTGCTTTTAATT

Flanking Amino Acid:

GEECDCGEPDECTNPCCNAT

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

68.1

37.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

63.6

0.31

0.9

54.9

35.8

Minor 5ss

34.7

-1.7

3.2

47.4

41.4

Minor BPS

63.6

0.5

1.3

72.08

39.9

Associated Gene:

Gene:

ADAM12

Ensembl Gene ID:

ENSAPLG00000011037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011573

33686514 - 33867693

181180