Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_33745624_33751525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33745624 - 33751525

Intron Length:

5902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TCTTCTTTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

CCTTTTTCATCT

Flanking Amino Acid:

DTAHHSQAGRYKRETLKTTK

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.59

1.1

63.3

43.4

Major BPS

100

1.24

0.5

100

Major PPT

82.2

0.72

0.9

80.1

31.8

Minor 5ss

30.2

-2.3

3.3

31.3

42.9

Minor BPS

49.1

0.01

1.8

66.8

44.7

Associated Gene:

Gene:

ADAM12

Ensembl Gene ID:

ENSAPLG00000011037

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011573

33686514 - 33867693

181180