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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33896460_33910231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33896460 - 33910231

Intron Length:

13772

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTGTTTTTCACA

Flanking Amino Acid:

FHLPNSSDEAGTQMSSGSQR

Intron Amino Acid Position:

407

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.8

1.15

0.6

96.1

12.1

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

83.7

0.76

0.8

79.2

32.9

Minor 5ss

37.4

-1.4

2.8

50.6

45.9

Minor BPS

55.7

0.17

1.8

65.7

41.8

Associated Gene:

Gene:

C10orf90

Ensembl Gene ID:

ENSAPLG00000010978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047003

33882154 - 33944142

61989

ENSAPLT00000040054

33881337 - 33944142

62806

ENSAPLT00000011419

33881337 - 33942385

61049