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Intron Name: Anas_platyrhynchos_platyrhynchos_6_33913370_33943976_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33913370 - 33943976

Intron Length:

30607

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTGTTTCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATGAT

U12 Branch Point Sequence:

TTTCCCTGCATT

Flanking Amino Acid:

YCSWKGAGCLGAAQKQWGSN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.2

37.4

Major BPS

69.5

0.48

1.2

59.7

46.7

Major PPT

81.3

0.7

0.9

73.3

41.4

Minor 5ss

38.8

-1.3

2.9

46.2

Minor BPS

59.1

0.37

1.9

82.5

38.8

Associated Gene:

Gene:

C10orf90

Ensembl Gene ID:

ENSAPLG00000010978

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047003

33882154 - 33944142

61989

ENSAPLT00000040054

33881337 - 33944142

62806