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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34039806_34041280_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34039806 - 34041280

Intron Length:

1475

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTTAA

U12 Branch Point Sequence:

TATTACTTAACT

Flanking Amino Acid:

HLKEAIVEGKGQHETVIPNE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

0.9

78.3

32.5

Major BPS

74.4

0.61

0.9

63.9

34.9

Major PPT

78.2

0.64

83.1

32.3

Minor 5ss

38.9

-1.3

2.9

44.3

43.6

Minor BPS

1.11

1.3

94.79

31.4

Associated Gene:

Gene:

DOCK1

Ensembl Gene ID:

ENSAPLG00000010685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011140

34021578 - 34278646

257069