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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34083993_34090506_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34083993 - 34090506

Intron Length:

6514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCAGA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTGAA

U12 Branch Point Sequence:

AGGTCCTGAACT

Flanking Amino Acid:

IVHSDLFTQHDCREILLPTM

Intron Amino Acid Position:

854

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

69.3

43.2

Major BPS

69.6

0.49

59.5

Major PPT

0.54

68.5

42.1

Minor 5ss

39.2

-1.2

2.9

49.5

46.5

Minor BPS

0.74

1.4

80.6

40.6

Associated Gene:

Gene:

DOCK1

Ensembl Gene ID:

ENSAPLG00000010685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011140

34021578 - 34278646

257069