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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34218464_34221668_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34218464 - 34221668

Intron Length:

3205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTGTAAGGAAAT

Flanking Amino Acid:

NRMSCTVNVLNFYKEIEREE

Intron Amino Acid Position:

1205

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

70.6

41.3

Major BPS

68.1

0.45

58.1

38.5

Major PPT

93.6

0.98

0.7

92.3

26.6

Minor 5ss

38.9

-1.3

2.9

45.6

43.8

Minor BPS

40.5

-0.6

2.4

64.68

44.8

Associated Gene:

Gene:

DOCK1

Ensembl Gene ID:

ENSAPLG00000010685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011140

34021578 - 34278646

257069