Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_6_34226671_34235061_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34226671 - 34235061

Intron Length:

8391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCGACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTTTTTCGACA

Flanking Amino Acid:

EIIHYFDKGKMWEEAIALGK

Intron Amino Acid Position:

1289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

68.8

42.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

0.81

0.9

84.3

30.8

Minor 5ss

32.2

-2

40.4

45.3

Minor BPS

65.1

0.47

1.5

77.83

32.5

Associated Gene:

Gene:

DOCK1

Ensembl Gene ID:

ENSAPLG00000010685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011140

34021578 - 34278646

257069