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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34243659_34247124_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34243659 - 34247124

Intron Length:

3466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGATCA

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGCTCCTTAATT

Flanking Amino Acid:

RWFEVKSVFMVEISPLENAI

Intron Amino Acid Position:

1485

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

73.1

31.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

80.5

0.69

0.8

78.5

34.6

Minor 5ss

38.4

-1.3

45.7

43.4

Minor BPS

83.2

1.12

1.1

88.65

36.5

Associated Gene:

Gene:

DOCK1

Ensembl Gene ID:

ENSAPLG00000010685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011140

34021578 - 34278646

257069