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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34248409_34253161_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34248409 - 34253161

Intron Length:

4753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATT

5'SS Class:

strong_major

3'SS Sequence:

TTGTGCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAG

U12 Branch Point Sequence:

AGCACACTAAGG

Flanking Amino Acid:

EKLKDLIAWQIPFLAEGIRI

Intron Amino Acid Position:

1572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

27.5

Major BPS

50.4

0.01

1.5

59.3

35.9

Major PPT

82.9

0.74

0.9

77.1

37.1

Minor 5ss

38.8

-1.3

3.2

57.6

46.6

Minor BPS

39.6

-0.9

2.1

41.48

42.3

Associated Gene:

Gene:

DOCK1

Ensembl Gene ID:

ENSAPLG00000010685

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011140

34021578 - 34278646

257069