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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34354564_34354676_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34354564 - 34354676

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTAAGGCGC

5'SS Class:

major

3'SS Sequence:

CCTCTCTCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCCGAC

U12 Branch Point Sequence:

TTTTCCTCTCTC

Flanking Amino Acid:

KKVPRDDDDPGKGSYWTLDP

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

58.8

42.8

Major BPS

40.5

-0.6

1.3

29.5

35.8

Major PPT

77.7

0.62

0.7

72.4

25.7

Minor 5ss

30.7

-2.2

3.2

33.6

41.9

Minor BPS

41.6

-0.6

3.7

70.76

Associated Gene:

Gene:

FOXI2

Ensembl Gene ID:

ENSAPLG00000027337

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022393

34353316 - 34355558

2243