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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34411262_34436991_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

34411262 - 34436991

Intron Length:

25730

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

GTCCTTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAC

U12 Branch Point Sequence:

ATTTTGTCACCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

74.9

0.62

1.1

77.4

37.4

Major PPT

84.1

0.77

0.8

76.1

37.8

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

46.8

-0.1

2.4

73.91

43.2

Associated Gene:

Gene:

PTPRE

Ensembl Gene ID:

ENSAPLG00000009861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031642

34410713 - 34502285

91573