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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34411262_34467689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34411262 - 34467689

Intron Length:

56428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGGG

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATCTTACGC

Flanking Amino Acid:

RGGGGRERARGSRMEHPCSF

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.1

45.2

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

87.1

0.84

0.7

84.6

30.3

Minor 5ss

29.9

-2.3

3.2

29.1

43.5

Minor BPS

54.3

0.11

70.24

41.4

Associated Gene:

Gene:

PTPRE

Ensembl Gene ID:

ENSAPLG00000009861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039336

34410713 - 34502285

91573