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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34437074_34467689_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

34437074 - 34467689

Intron Length:

30616

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TCTTGTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTTATCTTACGC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

75.1

40.8

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

87.1

0.84

0.7

84.6

30.3

Minor 5ss

40.4

-1.1

2.9

61.4

42.9

Minor BPS

54.3

0.11

70.24

41.4

Associated Gene:

Gene:

PTPRE

Ensembl Gene ID:

ENSAPLG00000009861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031642

34410713 - 34502285

91573