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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34484369_34485566_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34484369 - 34485566

Intron Length:

1198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTCAGTAAC

5'SS Class:

major

3'SS Sequence:

GTGTTCCCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGAGAT

U12 Branch Point Sequence:

AGATGTCCAACT

Flanking Amino Acid:

YTIRKFCVQSLHDGCKALRL

Intron Amino Acid Position:

259

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.3

72.7

38.8

Major BPS

55.2

0.13

1.2

52.5

43.3

Major PPT

77.1

0.61

0.9

70.4

36.3

Minor 5ss

31.9

-2.1

2.6

38.5

39.3

Minor BPS

43.2

-0.4

2.1

61.25

42.1

Associated Gene:

Gene:

PTPRE

Ensembl Gene ID:

ENSAPLG00000009861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039336

34410713 - 34502285

91573

ENSAPLT00000031642

34410713 - 34502285

91573

ENSAPLT00000021567

34454363 - 34502285

47923

ENSAPLT00000010307

34474953 - 34502285

27333