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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34485728_34488271_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34485728 - 34488271

Intron Length:

2544

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTTTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTTTTTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTCAA

U12 Branch Point Sequence:

CTCCTTTTTAAG

Flanking Amino Acid:

AHAGPVVVHCSAGVGRTGTF

Intron Amino Acid Position:

312

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.9

78.8

38.3

Major BPS

66.8

0.42

1.1

69.4

37.7

Major PPT

77.9

0.63

82.4

26.6

Minor 5ss

42.4

-0.8

3.1

57.3

47.4

Minor BPS

43.9

-0.6

1.7

44.74

41.5

Associated Gene:

Gene:

PTPRE

Ensembl Gene ID:

ENSAPLG00000009861

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021567

34454363 - 34502285

47923

ENSAPLT00000010307

34474953 - 34502285

27333

ENSAPLT00000039336

34410713 - 34502285

91573

ENSAPLT00000031642

34410713 - 34502285

91573