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Intron Name: Anas_platyrhynchos_platyrhynchos_6_3456739_3457862_R

Intron Information:

Intron Rank:

133058

Intron Class:

major

Intron Phase:

Intron Coordinates:

3456739 - 3457862

Intron Length:

1124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGAACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGTCATTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TTTCTTGTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

76.1

32.7

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

68.4

0.41

1.1

72.3

37.2

Minor 5ss

33.9

-1.8

2.9

38.9

40.1

Minor BPS

45.8

-0.2

2.3

71.97

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018834

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035111

3454817 - 3457990

3174