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Intron Name: Anas_platyrhynchos_platyrhynchos_6_34596191_34601990_F

Intron Information:

Intron Rank:

125412

Intron Class:

major

Intron Phase:

Intron Coordinates:

34596191 - 34601990

Intron Length:

5800

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGCGTATT

5'SS Class:

major

3'SS Sequence:

TGTTTCCCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TCATTTTTAAAC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.7

0.35

1.1

71.4

Major BPS

90.4

0.7

90.2

19.3

Major PPT

0.76

0.8

78.1

30.7

Minor 5ss

38.1

-1.3

3.3

60.5

Minor BPS

64.3

0.43

1.3

67.66

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017573

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047155

34595700 - 34624494

28795