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Intron Name: Anas_platyrhynchos_platyrhynchos_6_35385348_35387846_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

35385348 - 35387846

Intron Length:

2499

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCTGG

5'SS Class:

strong_major

3'SS Sequence:

GAGAGATAACAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

TTGTATTGAACA

Flanking Amino Acid:

CTSANGNGLQECLSGLVITA

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

65.8

42.7

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

43.4

-0.3

1.1

28.6

39.9

Minor 5ss

37.8

-1.4

46.8

48.5

Minor BPS

61.6

0.36

1.6

73.22

38.5

Associated Gene:

Gene:

EBF3

Ensembl Gene ID:

ENSAPLG00000012647

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013188

35385223 - 35428252

43030